BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F05LP1|AL426241
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1556 1582 0.0
>3x_Contig1556
Length = 10874
Score = 1582 bits (798), Expect = 0.0
Identities = 798/798 (100%)
Strand = Plus / Plus
Query: 1 aaacttaaaatttaaaaataagaaacaaaaaagtgaaggaatcacagatcgaagggtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4889 aaacttaaaatttaaaaataagaaacaaaaaagtgaaggaatcacagatcgaagggtatc 4948
Query: 61 tggaatcaatttgaagaactgtaccaaaaaaattcagaagaagagactactccactacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4949 tggaatcaatttgaagaactgtaccaaaaaaattcagaagaagagactactccactacca 5008
Query: 121 ttattttattattattattattattattactactagattcggttttcttcctcttttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5009 ttattttattattattattattattattactactagattcggttttcttcctcttttttc 5068
Query: 181 tcaaaagaattaagaaaataacctttctcaacacccatggcattgcaaatagaaggaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5069 tcaaaagaattaagaaaataacctttctcaacacccatggcattgcaaatagaaggaaag 5128
Query: 241 agaggagtaatatggtatcattttactgaccctttcctttcaataaaaaattgggatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5129 agaggagtaatatggtatcattttactgaccctttcctttcaataaaaaattgggatcaa 5188
Query: 301 gatatgttaattgtttccaagtcttagtcatgtttatttatttcatctgtacctaaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5189 gatatgttaattgtttccaagtcttagtcatgtttatttatttcatctgtacctaaaacc 5248
Query: 361 ttttgttcatctaacattttctttggcacttatttaatttgtaaatgaaaagaaaaaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5249 ttttgttcatctaacattttctttggcacttatttaatttgtaaatgaaaagaaaaaaac 5308
Query: 421 aatccgtacagcagtccgtcatactttttctttgatgtttatgctcacattattgtctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5309 aatccgtacagcagtccgtcatactttttctttgatgtttatgctcacattattgtctca 5368
Query: 481 ttatgttgatcttcatgcttaaatatttgacgatatattatgtcgtgcaatctttatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5369 ttatgttgatcttcatgcttaaatatttgacgatatattatgtcgtgcaatctttatttg 5428
Query: 541 aggctagtatgggtttgagataaacagttttggtccatgaaattctgataaacgaggact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5429 aggctagtatgggtttgagataaacagttttggtccatgaaattctgataaacgaggact 5488
Query: 601 gtttaaactttagttaacacccgtacacccattggttttatttctttcaaaatttggtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5489 gtttaaactttagttaacacccgtacacccattggttttatttctttcaaaatttggtgt 5548
Query: 661 atctcgggaaattcaaaaactgaaagaaattaccgtatttagtatttctgctgctccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5549 atctcgggaaattcaaaaactgaaagaaattaccgtatttagtatttctgctgctccatt 5608
Query: 721 ttcgtcagattgcaggttttcgcctgccacttcatagttcagacaatgaaccttcacttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5609 ttcgtcagattgcaggttttcgcctgccacttcatagttcagacaatgaaccttcacttc 5668
Query: 781 aaacatcaattgaaagga 798
||||||||||||||||||
Sbjct: 5669 aaacatcaattgaaagga 5686
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,451
Number of Sequences: 1807
Number of extensions: 11451
Number of successful extensions: 523
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)